Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015928080.1_cds_XP_016475730.1_67632
CDS Infomation	[gene=LOC107797361] [db_xref=GeneID:107797361] [protein=E3 ubiquitin-protein ligase PRT6-like] [partial=5'] [protein_id=XP_016475730.1] [location=complement(join(36718..36792,36984..37052,38578..38655,38752..38818,38907..39011,39104..39639,39751..39959,40049..40676,40757..40808,41118..41782,41910..42110,44891..45598,45671..45914,70733..70873,71008..72203,73007..>73696))] [gbkey=CDS]
Sequence	ATCATATATACGGGTGGTGGCTGCTGTGATTGTGGAGATGTATCTGCTTGGAAACGTGAG GGATTCTGTTCCAAGCATAAAGGTGTGGAGCAGATAGAACCTCTTCCGGAAGAGTTTGCT AATTCTTTGGGCCCCGTTCTTGATTCCTTGCTGTCTTGTTGGAGAAAAGGGCTCCTATTT GCGGAAAGCATCTCTGAGCAAAGTCCAAGACTAAATAGTCATGCAACTAAATATAAAAGT ATCACACATGAGTTGACATCAGCAGTGGTTGAGATGCTTTTGGATTTCTGCAAGAATAGT GAAAGTTTGCTTAGTTTTATCTCTAGAAGGGTATTCTCTTCAGAAGGTTTATTAGATGTT CTGGTGAGGGCAGAGAGGTTCATGATCAGTGGTAATATTGTGAGGAAGCTCCATGAATTG CTCTTGAAATTGTTGGGTGAACCTCAATTTAAATATGAGTTCGCTAAAGTATTTCTTAGC TATTACCCAACTGTTGTGAATGAAGCAATAAAGGAAGGTAATGACAGAGTCTTCAAAAAA TATCCACTTCTCTCAACATTCTCTGTGCAGATATTAACGGTGCCTACTTTGACCCCACGT CTTGTAAAAGAGATGAATCTTTTGACCATGTTGCTGGACTGTTTAGGGGACATACTTATG TCTTGTGCAGGAGAAAATGGTAGATTGAAGGTCATTAAATGGGGAAATTTGTATGAAACT ACTCTTCGTGTGGTTGAAGACATTCGATTTGTCATGAGTCATTCTGCTGTACCTAGATAC ATGATTCATCATCGACGGGATATACTCAGGACATGGATGAAGCTATTGACCTTTGTGCAA GGAATGAGCCCTCAAAAGAGAGACATCGGCATCCATGTAGAAGAGGAGAATGAAAATATG AATTTGCCTTTTGTTTTGGGTCATACAATTGCAAATATTCACTCTCTATTTGTGGGTGGT GCATTCTCTATTAGTAGCACTGAAGATGCTGATGATGCTCTATTCACGCATACACCAGAT TTTGAAGATCAAGATAGCCAAAGACATGCAAAAGTTGGAAAGCTATCACCGGAAAGTTCT GTTAGTAGTGTGACCGGGAGGAGTCCATTGGAACATGCATCCGTGACTCCTGAATCAAAA TCTGATAGTTCTCCGTTACCGTCATCTGTTCTATGGTTGACATTTGAGTGCCTGAGGGCC ATCGAGAATTGGTTAAGGGTGGATAACACATCAGGACCTTTCCTTCACGTCTTATTCCCG AAAACAAACTCCAGTTCTGGAAATAATTTCTTTGCGCCGAAAAGAACACTTTCGAAGTTT AGAAGGGGAAGGAAAATTATTAGATCTCATAGTTCTTCAAATGGTATTAGAATCTCAAGT TCAACTGAAGATTCCAATAAGCAATATTCTTATCTGTCACTGAATGGTGGTATTGCCTTG GATTCTGGACAGAATTTGGCCCAAGAAACAACTGGCTTTGGAGGTGTTGATGACAGTATG CTTGAAGGAGATTATGACCTTGAGTTGGAAGCTCTCCGGGTGCTGAGTTTGTCTGATTGG CCTAATATAGCATATAAAGTCAGTTTGCAGGAAATATCAGTTCATATTCCACTGCATCGA TTACTTTCAATGGTTTTACAGGGGGCACTCAGACAATGTTATGGTGAAACTGCCCTTGGT GGTAGTGGTTCCAATTCGTCATCTGCTATCTATCATGACTTTTTTGGCAGAATATTGGGA GGCTGCCACCCACTTGGCTTTTCTGCCTTCATTATGGAACATGCTCTCCAAATTAAGGTG TTTTGTGCCCAGGTCCATGCTGGAATGTGGCGTAGGAATAGTGATACTGCCATATTATCC TGGGAGTGGTATCGCTCTGTTCGTTGGTCTGAGCAGGGTCTAGAGCTTGATCTCTTTCTG CTCCAGTGTTGTGCTGCACTAGGCCCATCCGATCAATACGTTACTAGGATTTTAGAACGT TTTGAGCTCTCAGATTACTTATCCTTGAATCTTGAACGCTCTAATGAGTATGAGCCGACT ATAGTTCAAGAGATGCTTACTCTTATTATACAAATAGTGAAAGAAAGACGGTTTTCTGGG CTATCCCTTAGTGAGTGTTTGCAAAGGGAATTGGTATATAAACTATCAACTGGTGATGCC ACTCGTAGCCAGTTGGTGAAATCTTTGCCTCGTGACTTGTCCAAGATCGATAAACTTCAA GAGGTTTTGGATAGGATAGCAGTGTACTCCAATCCCTCTGGCATGAATCAGGGTATGTAT AAACTCCGGGCGTCCTATTGGACGGAGCTAGATTTATACCATCCTCGTTGGAACTCAAAG GAGTTGCAAGTTGCTGAAGAGAGATACATGCGGTTCTGTAATGTATCAGCATGGACCAAT CAGCTTCCAAAATGGACCAAGATTTATCCACCTCTTGGTGGAATAGCTCAAATAGCTACT TGCAGGACAGTACTCCAAATAGTTCGGGCTGTTGTATTCTATGCTATTTTCTCTGATAAA TCAAGCGATTTACGTGCTCCGGATGGTGTACTGTTAACAGCATTGCATTTGTTGTCTCTT GCATTAGATATTTGTTTTATGCATGGGGGATCTGGTGATCATAGTTGCTATGAGGATGAT GTCATTCCGATTGTAGCACTAGCTAGTGAAGAATTGTCATTGGGTAAATATGGTGATCAG AGCTTGTTGTCTCTTCTGGTTTTGTTGATGAGGAAATTTAGGAAAGAAAACGACTTTGTG GAAGCTGGAATATTCAACCTCTCTTCTTTAGTTGGAAGTCTATTGAAAAAATTTGCTGAA CTTCAACCTGGATGCAAGATAAAACTTCAAGACCTTGCACCTGACGTGGTCGATCAACTA TCGCAATCTGTGTTGACCGGTGATACTAACAACTTGGGATCAATTTCAGACAGTGATAAG CGCAAAGCTAAAGCTCGAGAGAGACAAGCTGCTATAATGGAAAAGATGAGGGTGCAACAA TCTAAGTTTTTACAGAGCATAGATTCCTTTGCAGAAGCTGGTTCAGATGATTCGAAACTT GGTAAAGAAAGAAGTGAATCAGATGTTAGACGTAATTCTGAAGAGGCTACTCCATTCATT TGCTCTCTCTGTCATGATCCAAATTCTAGAAGTCCTCTATCATACCTGATTCTTCTTCAG AAATCCAGACAACTGACTTTCACCAATAGAGGACCTCCTTCGTGGAAACAAACCCCCAAT TCCGGGAAAGAACCAGCATCTTGTGCCAAAAGATTGACAAATATCGCATCTCAAAGGAGC ATTTTATCAAGCAGTCGAGAAGTGATTTCATCTTTTCAGTTGACGCAATTGATTCAACAT GCAATAAATGAGTTTGCTCTGGAAGGGAAACCTAAGGAAGTAGGAGCATTTTTTGAATAT GTTAGGGCGAAGTTCCCAGCATTGAAGATTCAACTGCCTTGCACATCAAACAATGCCGAC GAAGACACAGATTTTTCTCTTGAGATGCTAGAAGAACAATTATATTCGTTCACACGCGAA AAGGTGGACGTCAATTCGTGGTACTGGGATTTTTTAAGAAATGATAAGAAAATTTCTGCA GGAGGAGGTGGTGGGAGTGTTGAGTCACTTTTGCTTGGGAAGTACATTTCTGCTCTTGCA GGAGAAAATCTTAATAGTCCTTCTGCATCTGAAAGTGTGTACAAGGTTCAACTAGAGTCA AGTACGCCGCTTTCAGCGTATTACGGATTTGGTCTCTCAGATTGTGATGGAATTTATCTT TCATCGTGTGGACATGCTGTGCATCAGGGATGTCTTGACCGCTATTTATCATCACTAAAG GAAAGATATAACAGAAGACTTGTTTTTGAAGGAGGTCATATTGTAGATCCAGATCAGGGT GAGTTTCTTTGTCCTGTATGCCGTGGACTTGCCAACTCAGTCCTGCCAGCATTACCTGCA GATTCCGGAAGGTTCACATCCATTTGCTCAACTTCCAGTCCATCCGATGCTGTTGGCCCT TCACCGTTGTCAAGTGGAGCGGTAGATGCACTTCACTTTCAAGAAGCTTTATTTCTCCTA CAAAATGCAGCAGCTGTTGTTAGAAGTAGAGAGATTCTCCAAAGACTTCCACTTTGGCAG TTTGGGAGGATGAAAGTAAACCTTGAACCTGTGTATCGTATGTTGTGTGGAATGTACTTT CCGGACAAGGATAAGATTTCAGAATCTGGTAGACTTAGTCACTCTTTGATTCTATATGAC ACTCTTAGGTACTCACTTGTAGCCACTGAAATTGCTGCTCGAGGGGGAAATACATCATTA GCTCCAAACTACAGTCATGGTGCCTTGTACAAAGAACTCCAATCTTCAAATGGTTTTATA TTGGCTTTGTTACTAAGTATTGTACAAAGCACACAAACAAAGAACTCACTTACTGTCCTC TTGAGATTGAGAGGCATTCAGCTGTTTGCAGAGTCTATATGCGCTGGAACCTCTGCAGAT AAAATTCCAGATCCATCTTTTGGAGGTAATATGCAAGACATCTTAGAATGCGCTGAAACA GAAGATCAGTATCCTGATATTCAGTTTTGGAGATGGTCCTCTGATCCAGTTCTTGCACAT GATGCTTTTTCTTCATTAATGTGGACAATATATTGCCTTCCATGTCCATTGTTGTCATGC GAAGATGCCTTCTTGTCCCTTGTTCATCTTTTCTATGTTGTTGCTGTCACTCAGGCTGTA ATAACCTATTGCAGAGCGCACCAATGCAATATGCCTGAGTTAGGATGCAATGATTCTCTA CTTACTGACATCTATAAAGTAATTGGAGAACATGGAGTTGCTCAGGAATATTTTAATTCT AATTTTATAGAAACTTATGATATCAAAGATGCAATTCGCAGTTTGACTTTTCCTTACTTA AGAAGATGTATATTGTTGTGGAAATTGATTCATTCTTCTAGAGTGGTGCCATTTAGTGGT GGGATTAACAAGTTAGATGAATCAGCATATCCAACTAATGAACTGATGTACTGTGGTGAT AACATTGCTACAGAGCTCGTTCAGATTAAAAAGTTAGAGAAGATATTAAAGATTCCCACA CTGGATAATGTTCTCAATGATGTCACAATTCGTCCAATGGTTCAAAAATGGCTGAATCAT TTCTACAAGGAGTTTGAATGTCGTGGTCTCAAGGATGTTTTATATTCCACTCCTGCAACC CCATTCAGAATGATGCTTTTGCCTCATCTTTATCAGGACCTCTTGCAGAGGTATATTAAA CAGAATTGCCCAGATTGCGGAGCTCTTCTGAGGGATCCTGCATTGTGCTTGTTATGTGGT AAATTGTGCTCCGCAAGTTGGAAGACATGTTGCAGGGAAAGTGGGTGCCAAACTCATGCA ATGGCCTGTGGTGCCGGTACTGGGGTGTTCTTGTTGATCAGAAAAACAACAATATGGCTT CACAGATCTGCTACTCAGGCACCATGGCCATCACCATATTTGGATGCATTTGGAGAAGAG GATATTGACATGCATAGGGGAAAGCCATTATATCTAAATGAGGAACGTTATGCTGCCTTA ACTCATATGGTGGCTTCTCATGGATTAGATCGAAGTTCAAAGATGCTTCGTCAGACAACT ATTGGCGCGCTTTTCATGCTTTAG

Peptide Sequence

PEP ID	XP_016475730.1
PEP Infomation	PREDICTED: E3 ubiquitin-protein ligase PRT6-like, partial [Nicotiana tabacum]
Sequence	IIYTGGGCCDCGDVSAWKREGFCSKHKGVEQIEPLPEEFANSLGPVLDSLLSCWRKGLLF AESISEQSPRLNSHATKYKSITHELTSAVVEMLLDFCKNSESLLSFISRRVFSSEGLLDV LVRAERFMISGNIVRKLHELLLKLLGEPQFKYEFAKVFLSYYPTVVNEAIKEGNDRVFKK YPLLSTFSVQILTVPTLTPRLVKEMNLLTMLLDCLGDILMSCAGENGRLKVIKWGNLYET TLRVVEDIRFVMSHSAVPRYMIHHRRDILRTWMKLLTFVQGMSPQKRDIGIHVEEENENM NLPFVLGHTIANIHSLFVGGAFSISSTEDADDALFTHTPDFEDQDSQRHAKVGKLSPESS VSSVTGRSPLEHASVTPESKSDSSPLPSSVLWLTFECLRAIENWLRVDNTSGPFLHVLFP KTNSSSGNNFFAPKRTLSKFRRGRKIIRSHSSSNGIRISSSTEDSNKQYSYLSLNGGIAL DSGQNLAQETTGFGGVDDSMLEGDYDLELEALRVLSLSDWPNIAYKVSLQEISVHIPLHR LLSMVLQGALRQCYGETALGGSGSNSSSAIYHDFFGRILGGCHPLGFSAFIMEHALQIKV FCAQVHAGMWRRNSDTAILSWEWYRSVRWSEQGLELDLFLLQCCAALGPSDQYVTRILER FELSDYLSLNLERSNEYEPTIVQEMLTLIIQIVKERRFSGLSLSECLQRELVYKLSTGDA TRSQLVKSLPRDLSKIDKLQEVLDRIAVYSNPSGMNQGMYKLRASYWTELDLYHPRWNSK ELQVAEERYMRFCNVSAWTNQLPKWTKIYPPLGGIAQIATCRTVLQIVRAVVFYAIFSDK SSDLRAPDGVLLTALHLLSLALDICFMHGGSGDHSCYEDDVIPIVALASEELSLGKYGDQ SLLSLLVLLMRKFRKENDFVEAGIFNLSSLVGSLLKKFAELQPGCKIKLQDLAPDVVDQL SQSVLTGDTNNLGSISDSDKRKAKARERQAAIMEKMRVQQSKFLQSIDSFAEAGSDDSKL GKERSESDVRRNSEEATPFICSLCHDPNSRSPLSYLILLQKSRQLTFTNRGPPSWKQTPN SGKEPASCAKRLTNIASQRSILSSSREVISSFQLTQLIQHAINEFALEGKPKEVGAFFEY VRAKFPALKIQLPCTSNNADEDTDFSLEMLEEQLYSFTREKVDVNSWYWDFLRNDKKISA GGGGGSVESLLLGKYISALAGENLNSPSASESVYKVQLESSTPLSAYYGFGLSDCDGIYL SSCGHAVHQGCLDRYLSSLKERYNRRLVFEGGHIVDPDQGEFLCPVCRGLANSVLPALPA DSGRFTSICSTSSPSDAVGPSPLSSGAVDALHFQEALFLLQNAAAVVRSREILQRLPLWQ FGRMKVNLEPVYRMLCGMYFPDKDKISESGRLSHSLILYDTLRYSLVATEIAARGGNTSL APNYSHGALYKELQSSNGFILALLLSIVQSTQTKNSLTVLLRLRGIQLFAESICAGTSAD KIPDPSFGGNMQDILECAETEDQYPDIQFWRWSSDPVLAHDAFSSLMWTIYCLPCPLLSC EDAFLSLVHLFYVVAVTQAVITYCRAHQCNMPELGCNDSLLTDIYKVIGEHGVAQEYFNS NFIETYDIKDAIRSLTFPYLRRCILLWKLIHSSRVVPFSGGINKLDESAYPTNELMYCGD NIATELVQIKKLEKILKIPTLDNVLNDVTIRPMVQKWLNHFYKEFECRGLKDVLYSTPAT PFRMMLLPHLYQDLLQRYIKQNCPDCGALLRDPALCLLCGKLCSASWKTCCRESGCQTHA MACGAGTGVFLLIRKTTIWLHRSATQAPWPSPYLDAFGEEDIDMHRGKPLYLNEERYAAL THMVASHGLDRSSKMLRQTTIGALFML

Transcript Sequence

Gene sequence data has not been registered.